Alcohol Dehydrogenase E Chain

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alcohol Dehydrogenase E Chain
  Conformer 1
(PDB)
1het (A)
  Conformer 2
(PDB)
7adh  
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 235 0.82   3 - 180   294 - 296   319 - 372
2 125 0.7   181 - 293   302 - 313

Sequence


           ________________________________________________________________________________________________________________________ 
 1het(A) : STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 
         :                                                                                                                          
 7adh    : STAGXvIXcXaAVLWEEXXpFSIEEVEVAPPXaHEVRIXmVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDXvIPLFTPQCGXcRVCKHPEGNFCLXnDLSMPR 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________180____________________________________________________________ 
 1het(A) : GTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC 
         :                                                                                                                          
 7adh    : GTMQDGTSRFTCRGXpIHHFLGTSTFSQYTVVDEISVAXiDAASPLEXvCLIGCGFSTGYGSAVXvAXvTQGSTCAVFGLGGVGLSVIMGCXaAGAARIIGVDINXdXfAXaKEVGATEC 
           _________________________________________________________180____________________________________________________________ 

           _________________________________________________292__________________313_______________________________________________ 
 1het(A) : VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFD 
         :                                                                                                                          
 7adh    : VNPQDYXkPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSXdSVPXlVADFMAKKFALDPLITHVLPFEXiNEGFD 
           _________________________________________________292__________________313_______________________________________________ 

           ______________                                                                                                           
 1het(A) : LLRSGESIRTILTF                                                                                                           
         :                                                                                                                          
 7adh    : LLRSGESIRTILTF                                                                                                           
           ______________                                                                                                           

Morph

Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
10.4
Translation
(A)
-0.3
Closure
(%)
77.8
Bending Residues
( green )
  180 - 181
  292 - 302
  313 - 319
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

Download and extract PyMOL PML script file Download