Anthranilate Phosphoribosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Anthranilate Phosphoribosyltransferase
  Conformer 1
(PDB)
2gvq (A)
  Conformer 2
(PDB)
2gvq (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 231 0.53   67 - 152   181 - 198   201 - 204   209 - 236   243 - 341
2 104 0.44   3 - 66   153 - 180   199 - 200   205 - 208   237 - 242

Sequence


           ________________________________________________________________66______________________________________________________ 
 2gvq(A) : MNINEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAGTgLGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSADVLE 
         :                                                                                                                          
 2gvq(C) : MNINEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAG-gLGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSADVLE 
           ________________________________________________________________66______________________________________________________ 

           ______________________148_____________________________180_______________198___204_208_________________________236__241__ 
 2gvq(A) : ALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRGIEE 
         :                                                                                                                          
 2gvq(C) : ALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRGIEE 
           ______________________148_____________________________180_______________198___204_208_________________________236__241__ 

           ______________________________________________________________________________________________________                   
 2gvq(A) : VKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIKINTAVALFALDRVGDFREGYEYADHLIEKSLDKLNEIISMNGDVTKLKTIVVKS**                   
         :                                                                                                                          
 2gvq(C) : VKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIKINTAVALFALDRVGDFREGYEYADHLIEKSLDKLNEIISMNGDVTKLKTIVVKSSG                   
           ______________________________________________________________________________________________________                   

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
7.5
Translation
(A)
0.2
Closure
(%)
99.9
Bending Residues
( green )
  66 - 67
  148 - 153
  180 - 181
  198 - 201
  204 - 205
  208 - 209
  236 - 237
  241 - 243
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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