Bbcrasp-1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bbcrasp-1
  Conformer 1
(PDB)
1w33 (B)
  Conformer 2
(PDB)
4bl4 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 152 0.47   73 - 224
2 22 0.26   225 - 246

Sequence


           ________________________________________________________________________________________________________________________ 
 1w33(B) : ETIASELKAIGKELEDQKKEENIQIAKIAKEKFDFLSTFKVGPYDLIDEDIQMKIKRTLYSSLDYKKENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQNLELIQNGVENLS 
         :                                                                                                                          
 4bl4(B) : ETIASELKAIGKELEDQKKEENIQIAKIAKEKFDFLSTFKVGPYDLIDEDIQMKIKRTLYSSLDYKKENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQNLELIQNGVENLS 
           ________________________________________________________________________________________________________________________ 

           ____________________________220_____________________________                                                             
 1w33(B) : QEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFNKYYKDFDTLKPA                                                             
         :                                                                                                                          
 4bl4(B) : QEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFNKYYKDFDTLKPA                                                             
           ____________________________220_____________________________                                                             

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
16.4
Translation
(A)
-0.5
Closure
(%)
94.7
Bending Residues
( green )
  220 - 226
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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