Bifunctional P-450/nadph-P450 Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bifunctional P-450/nadph-P450 Reductase
  Conformer 1
(PDB)
4kf2 (A)
  Conformer 2
(PDB)
5e9z (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 409 0.68   5 - 174   214 - 454
2 28 0.8   175 - 213

Sequence


           ________________________________________________________________________________________________________________________ 
 4kf2(A) : ****KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFFGDGLVTSWTHEKNWKKAHNILLPSFSQQAMKGYHAM 
         :                                                                                                                          
 5e9z(C) : SMTIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGLVTRYLSSQRLIKEACDGSRFDKNLSQALKFVRDIAGDGLVTSWTHEKNWKKAHNILLPSFSQQAMKGYHAM 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________174__________________________________213___________________________ 
 4kf2(A) : MVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRAdDPAYDENKRQFQEDIKVMNDLVDKIIADRKASqSDDLLTHMLNGKD 
         :                                                                                                                          
 5e9z(C) : MVDIAVQLVQKWERLNADEHIEVPGDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKQQ---------nKRQFQEDIKVMNDLVDKIIADRKASGEdDLLTHMLNGKD 
           _____________________________________________________174__________________________________213___________________________ 

           ________________________________________________________________________________________________________________________ 
 4kf2(A) : PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 
         :                                                                                                                          
 5e9z(C) : PETGEPLDDENIRYQIITFLIAGHVTTSGLLSFALYFLVKNPYVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________________________________                          
 4kf2(A) : DKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGG                          
         :                                                                                                                          
 5e9z(C) : DKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLSMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLG*                          
           _______________________________________________________________________________________________                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
20.7
Translation
(A)
1.2
Closure
(%)
99.6
Bending Residues
( green )
  174 - 175
  213 - 216
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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