Camp-Dependent Protein Kinase (E.C.2.7.1.37)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Camp-Dependent Protein Kinase (E.C.2.7.1.37)
  Conformer 1
(PDB)
1atp (E)
  Conformer 2
(PDB)
1ctp (E)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 219 1.21   17 - 29   93 - 105   122 - 179   181 - 181   185 - 318
2 102 1.41   30 - 92   106 - 121   180 - 180   182 - 184   328 - 348

Sequence


           _____________________29_____________________________________________________________92__________105_____________121_____ 
 1atp(E) : ********VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 
         :                                                                                                                          
 1ctp(E) : KKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGG 
           _____________________29_____________________________________________________________92__________105_____________121_____ 

           __________________________________________________179__184______________________________________________________________ 
 1atp(E) : EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 
         :                                                                                                                          
 1ctp(E) : EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 
           __________________________________________________179__184______________________________________________________________ 

           ___________________________________________________________________316__________________________________                 
 1atp(E) : YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCGKEFTEF                 
         :                                                                                                                          
 1ctp(E) : YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKf---------DDYEEEEIRVS--eKCGKEFSEF                 
           ___________________________________________________________________316__________________________________                 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
15.1
Translation
(A)
0.9
Closure
(%)
91.7
Bending Residues
( green )
  29 - 30
  92 - 93
  105 - 106
  121 - 122
  179 - 182
  184 - 185
  316 - 330
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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