Ectonucleoside Triphosphate Diphosphohydrolase I

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ectonucleoside Triphosphate Diphosphohydrolase I
  Conformer 1
(PDB)
4br4 (A)
  Conformer 2
(PDB)
4br9 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 225 0.65   120 - 123   157 - 375   390 - 391
2 127 0.94   40 - 119   124 - 156   376 - 389

Sequence


           ___________________________________________________________________________________119_123______________________________ 
 4br4(A) : ****PCEKHSCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPNSVTIDAYLTMLLADAPIHNIPVYFYATAGMRLLPQSQQKKYYDELDYWFRQQSQWQLVEAKT 
         :                                                                                                                          
 4br9(A) : MDTNPCEKHSCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPNSVTIDAYLTMLLADAPIHNIPVYFYATAGMRLLPQSQQKKYYDELDYWFRQQSQWQLVEAKT 
           ___________________________________________________________________________________119_123______________________________ 

           156_____________________________________________________________________________________________________________________ 
 4br4(A) : ITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQNINLYVHSFLGLGQTEMSHQFLNSPSCFANDYPLPDGESGQGNAPSCKEEVTSLMN 
         :                                                                                                                          
 4br9(A) : ITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQNINLYVHSFLGLGQTEMSHQFLNSPSCFANDYPLPDGESGQGNAPSCKEEVTSLMN 
           156_____________________________________________________________________________________________________________________ 

           ___________________________________________________________________________________________________375___________389____ 
 4br4(A) : SVHKVNQQIQPLLALNPVNEWYSIGGISNLASSQLFHFENSELTNQSLLQQGDNQICHQQWDILNGQYPDDEYLYQYCLLSSYYYALMVDGYGINPNQTIHYIPPEQNLDWTIGVVLHRA 
         :                                                                                                                          
 4br9(A) : SVHKVNQQIQPLLALNPVNEWYSIGGISNLASSQLFHFENSELTNQSLLQQGDNQICHQQWDILNGQYPDDEYLYQYCLLSSYYYALMVDGYGINPNQTIHYIPPEQNLDWTIGVVLHRA 
           ___________________________________________________________________________________________________375___________389____ 

           _                                                                                                                        
 4br4(A) : *                                                                                                                        
         :                                                                                                                          
 4br9(A) : L                                                                                                                        
           _                                                                                                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
10.9
Translation
(A)
0.4
Closure
(%)
99.6
Bending Residues
( green )
  119 - 120
  123 - 124
  156 - 157
  375 - 385
  389 - 390
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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