Ferric Uptake Regulation Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ferric Uptake Regulation Protein
  Conformer 1
(PDB)
1mzb (A)
  Conformer 2
(PDB)
2w57 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 78 0.98   4 - 82
2 48 1.0   83 - 130

Sequence


           _______________________________________________________________________________81_______________________________________ 
 1mzb(A) : MVENSELRKAGLKVTLPRVKILQMLDSAq-RHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFE 
         :                                                                                                                          
 2w57(A) : *DNNQALKDAGLKVTLPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIEFSDDVIEQRQKEIAAKYNVQ 
           _______________________________________________________________________________82_______________________________________ 

           ______________                                                                                                           
 1mzb(A) : LVDHNLVLYVRKKK                                                                                                           
         :                                                                                                                          
 2w57(A) : LTNHSLYLYGKC**                                                                                                           
           ______________                                                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
30.7
Translation
(A)
-0.1
Closure
(%)
74.3
Bending Residues
( green )
  81 - 87
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download