Cell Division Protein Ftsy

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cell Division Protein Ftsy
  Conformer 1
(PDB)
2iyl (D)
  Conformer 2
(PDB)
1rj9 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 171 1.61   99 - 231   238 - 264   274 - 290
2 77 2.15   29 - 84   232 - 237   265 - 273   291 - 301

Sequence


           ________________________________________________________78______________________________________________________________ 
 2iyl(D) : AIPWGGNLEEVLEELEMALLAADVGLSATEEILQEVRASGRKDLKEAVKEKLVGMLEPD---aTLRKLGFNPQKp--VEPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDT 
         :                                                                                                                          
 1rj9(A) : ******NLEEVLEELEMALLAADVGLSATEEILQEVRASGRKDLKEAVKEKLVGMLEPDERRATLRKLGFNPQKPKPVEPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDT 
           ________________________________________________________78______________________________________________________________ 

           ________________________________________________________________________________________231_237______________________260 
 2iyl(D) : ------tQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQ--lEQAKKFHEAVGLTGVIVTKLDGT 
         :                                                                                                                          
 1rj9(A) : FRAAGGTQLSEWGKRLSIPVIQGPEGTDSAALAYDAVQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVGLTGVIVTKLDGT 
           ________________________________________________________________________________________231_237______________________260 

           ________271________________290______________                                                                             
 2iyl(D) : AKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLED                                                                             
         :                                                                                                                          
 1rj9(A) : AKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE*                                                                             
           ________271________________290______________                                                                             

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
22.7
Translation
(A)
0.9
Closure
(%)
55.1
Bending Residues
( green )
  78 - 99
  231 - 232
  237 - 238
  260 - 265
  271 - 274
  290 - 291
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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