Chaperone Protein Hscb

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chaperone Protein Hscb
  Conformer 1
(PDB)
1fpo (C)
  Conformer 2
(PDB)
1fpo (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 93 1.54   3 - 85   127 - 150
2 60 1.05   86 - 126   151 - 169

Sequence


           ____________________________________________________________________________78__________________________________________ 
 1fpo(C) : MDYFTLFGLPARYQLDTQALSLRFQDLQRQ--------------lAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKR 
         :                                                                                                                          
 1fpo(A) : MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKR 
           ____________________________________________________________________________78__________________________________________ 

           ___126_____________________150_____________________                                                                      
 1fpo(C) : VKKMFDTRHQLMVEQLDNETWDAAADTCRKLRFLDKLRSSAEQLEEKLLDF                                                                      
         :                                                                                                                          
 1fpo(A) : VKKMFDTRHQLMVEQLDNETWDAAADTCRKLRFLDKLRSSAEQLEEKLLDF                                                                      
           ___126_____________________150_____________________                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
16.1
Translation
(A)
-0.8
Closure
(%)
81.5
Bending Residues
( green )
  78 - 87
  126 - 127
  150 - 151
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download