Heat Shock Cognate 71 Kda

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Heat Shock Cognate 71 Kda
  Conformer 1
(PDB)
1hx1 (A)
  Conformer 2
(PDB)
1kaz  
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 272 0.8   7 - 228   314 - 336   353 - 379
2 101 0.63   229 - 313   337 - 352

Sequence


           ________________________________________________________________________________________________________________________ 
 1hx1(A) : *PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMV 
         :                                                                                                                          
 1kaz    : GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAERLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMV 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________________________________228_______________ 
 1hx1(A) : LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 
         :                                                                                                                          
 1kaz    : LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 
           ______________________________________________________________________________________________________228_______________ 

           ___________________________________________________________________313____________________336_____________352___________ 
 1hx1(A) : EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 
         :                                                                                                                          
 1kaz    : EFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSI 
           ___________________________________________________________________313____________________336_____________352___________ 

           __________________                                                                                                       
 1hx1(A) : NPDEAVAYGAAVQAAILS                                                                                                       
         :                                                                                                                          
 1kaz    : NPDEAVAYGAAVQAAILS                                                                                                       
           __________________                                                                                                       

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
12.7
Translation
(A)
0.0
Closure
(%)
88.9
Bending Residues
( green )
  228 - 229
  313 - 314
  336 - 337
  352 - 353
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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