Hypothetical Protein Rv2827c

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Hypothetical Protein Rv2827c
  Conformer 1
(PDB)
1zel (B)
  Conformer 2
(PDB)
1zel (A)
  Window Length 13
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 261 0.38   5 - 32   53 - 288
2 20 0.24   33 - 52

Sequence


           ____________________________27_______________________52_________________________________________________________________ 
 1zel(B) : GAMVVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWLVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQP 
         :                                                                                                                          
 1zel(A) : *AMVVSPAGADRRIPTWASRVVSGLARDRPVVVTKEDLTQRLTEAGCGRDPDSAIRELRRIGWLVQLPVKGTWAFIPPGEAAISDPYLPLRSWLARDQNAGFMLAGASAAWHLGYLDRQP 
           ____________________________27_______________________52_________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1zel(B) : DGRIPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDS 
         :                                                                                                                          
 1zel(A) : DGRIPIWLPPAKRLPDGLASYVSVVRIPWNAADTALLAPRPALLVRRRLDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVADCSDERLERLLSGRPTSAWQRASYLLDS 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________                                                                  
 1zel(B) : GGEPARGQALLAKRHTEVMPVTRFTTAHSgESVWAPEYQLVDELVVPLLRVIGKA                                                                  
         :                                                                                                                          
 1zel(A) : GGEPARGQALLAKRHTEVMPVTRFTTAHSgESVWAPEYQLVDELVVPLLRVIGK*                                                                  
           _______________________________________________________                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.0
Translation
(A)
-0.3
Closure
(%)
97.3
Bending Residues
( green )
  27 - 36
  52 - 53
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download