Class B Acid Phosphatase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Class B Acid Phosphatase
  Conformer 1
(PDB)
2hf7 (A)
  Conformer 2
(PDB)
1rmt (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 109 0.28   34 - 37   58 - 58   60 - 85   94 - 163   173 - 180
2 96 0.21   6 - 33   38 - 57   59 - 59   86 - 93   164 - 172   181 - 210

Sequence


           ______________________________33__37__________________57__________________________85______93____________________________ 
 2hf7(A) : SPSPLNPGTNVARLAEQAPIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTET 
         :                                                                                                                          
 1rmt(D) : **SPLNPGTNVARLAEQAPIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTET 
           ______________________________33__37__________________57__________________________85______93____________________________ 

           _______________________________________163_____171______180________________________________                              
 2hf7(A) : VSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTYKPLPQAGAFGEEVIVNSEY                              
         :                                                                                                                          
 1rmt(D) : VSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTYKPLPQAGAFGEEVIVNSEY                              
           _______________________________________163_____171______180________________________________                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
2.3
Translation
(A)
0.0
Closure
(%)
99.9
Bending Residues
( green )
  33 - 34
  37 - 38
  57 - 60
  85 - 86
  93 - 94
  163 - 164
  171 - 173
  180 - 181
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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