Cyanovirin-N

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cyanovirin-N
  Conformer 1
(PDB)
3ezm (A)
  Conformer 2
(PDB)
1m5j (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 49 0.44   3 - 51
2 48 0.77   52 - 99

Sequence


           _______________________________________________49____________________________________________________                    
 3ezm(A) : LGKFSQTCYNSAIQGSVLTSTCERTNGGYNTSSIDLNSVIENVDGSLKWQPSNFIETCRNTQLAGSSELAAECKTRAQQFVSTKINLDDHIANIDGTLKYE                    
         :                                                                                                                          
 1m5j(A) : LGKFSQTCYNSAIQGSVLTSTCERTNGGYNTSSIDLNSVIENVDGSLKWQPSNFIETCRNTQLAGSSELAAECKTRAQQFVSTKINLDDHIANIDGTLKYE                    
           _______________________________________________49____________________________________________________                    

Morph

Morph animation in progress.
Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
72.4
Translation
(A)
0.4
Closure
(%)
100.0
Bending Residues
( green )
  49 - 55
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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