Aac(6')-II

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aac(6')-II
  Conformer 1
(PDB)
2a4n (A)
  Conformer 2
(PDB)
2a4n (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 107 0.4   62 - 75   80 - 82   86 - 175
2 66 0.66   3 - 61   76 - 79   83 - 85

Sequence


           ___________________________________________________________61____________75__79_82_85___________________________________ 
 2a4n(A) : MIISEFDRNNPVLKDQLSDLLRLTWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTL 
         :                                                                                                                          
 2a4n(B) : MIISEFDRNNPVLKDQLSDLLRLTWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTL 
           ___________________________________________________________61____________75__79_82_85___________________________________ 

           ____________________________________________________________                                                             
 2a4n(A) : SQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGVLPNANGWDKPDIWMAKTIIPRPD                                                             
         :                                                                                                                          
 2a4n(B) : SQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGVLPNANGWDKPDIWMAKTIIPRP*                                                             
           ____________________________________________________________                                                             

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.0
Translation
(A)
0.0
Closure
(%)
97.7
Bending Residues
( green )
  61 - 62
  75 - 76
  79 - 80
  82 - 83
  85 - 86
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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