Actin-Like Protein 3

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Actin-Like Protein 3
  Conformer 1
(PDB)
2p9l (A)
  Conformer 2
(PDB)
2p9k (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 233 0.6   79 - 83   114 - 117   148 - 377
2 156 0.26   5 - 78   84 - 113   118 - 147   378 - 411

Sequence


           ________________________________________________________________78___83___________________________113_117_______________ 
 2p9l(A) : AGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKEvMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFE 
         :                                                                                                                          
 2p9k(A) : *GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKE-mKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFE 
           ________________________________________________________________78___83___________________________113_117_______________ 

           _______142______________________________________________________________________________________________________________ 
 2p9l(A) : SFNVPGLYIAVQAVLALAASWTSqVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWI 
         :                                                                                                                          
 2p9k(A) : SFNVPGLYIAVQAVLALAASWTS-vGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWI 
           _______142______________________________________________________________________________________________________________ 

           _____________________________________________________________________________________________________________________377 
 2p9l(A) : KQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSkPKPIDVQVITHHMQRYAV 
         :                                                                                                                          
 2p9k(A) : KQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSkPKPIDVQVITHHMQRYAV 
           _____________________________________________________________________________________________________________________377 

           _______________________________________                                                                                  
 2p9l(A) : WFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGV                                                                                  
         :                                                                                                                          
 2p9k(A) : WFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPV***                                                                                  
           _______________________________________                                                                                  

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
4.9
Translation
(A)
0.3
Closure
(%)
91.3
Bending Residues
( green )
  78 - 79
  83 - 84
  113 - 114
  117 - 118
  142 - 148
  377 - 378
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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