Adenosine Deaminase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Adenosine Deaminase
  Conformer 1
(PDB)
2ada  
  Conformer 2
(PDB)
1uw6 (A)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 78 16.38   96 - 133   135 - 135   151 - 172   178 - 194
2 22 8.52   95 - 95   134 - 134   136 - 150   173 - 177

Sequence


           __________________________________________________________________________________________95____________________________ 
 2ada    : TPAFNKPKVELHVHLDGAIKPETILYFGKKRGIALPADTVEELRNIIGMDKPLSLPGFLAKFDYYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPWNQTEGD 
         :                                                                                                                          
 1uw6(A) : ****************************************************************************EFDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNE 
           __________________________________________________________________________________________15____________________________ 

           __128___________________150___________________172__177__________________________________________________________________ 
 2ada    : VTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPSWSLEVLELCKKYNQKTVVAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVREAVDILKTERVGHGYHTI 
         :                                                                                                                          
 1uw6(A) : ITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSE 
           ___48____________________70____________________92___97__________________________________________________________________ 

           _____________________________________________________________________________________________________________            
 2ada    : EDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLPEEEKKELLERLYREYQ            
         :                                                                                                                          
 1uw6(A) : YFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRS*****************************************************************            
           _____________________________________________________________________________________________________________            

Morph

Morph animation in progress.
Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
126.0
Translation
(A)
-3.1
Closure
(%)
86.4
Bending Residues
( green )
  95 - 96
  128 - 136
  150 - 151
  172 - 173
  177 - 178
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

Download and extract PyMOL PML script file Download