Adp-Ribosyl Cyclase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Adp-Ribosyl Cyclase
  Conformer 1
(PDB)
1r12 (A)
  Conformer 2
(PDB)
3i9j (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 206 0.49   3 - 44   48 - 51   67 - 112   134 - 247
2 25 0.38   45 - 47   52 - 66   113 - 119

Sequence


           __________________________________________44_47_________________66___________________________________________112____119_ 
 1r12(A) : IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGF 
         :                                                                                                                          
 3i9j(A) : IVPTRELENVFLGRCKDYEITRYLDILPRVRSDCSALWKDFFKAFSFKNPCDLDLGSYKDFFTSAQQQLPKNKVMFWSGVYDEAHDYANTGRKYITLEDTLPGYMLNSLVWCGQRANPGF 
           __________________________________________44_47_________________66___________________________________________112____119_ 

           ________________________________________________________________________________________________________________________ 
 1r12(A) : NEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCS 
         :                                                                                                                          
 3i9j(A) : NEKVCPDFKTCPVQARESFWGMASSSYAHSAEGEVTYMVDGSNPKVPAYRPDSFFGKYELPNLTNKVTRVKVIVLHRLGEKIIEKCGAGSLLDLEKLVKAKHFAFDCVENPRAVLFLLCS 
           ________________________________________________________________________________________________________________________ 

           ___________                                                                                                              
 1r12(A) : DNPNARECRLA                                                                                                              
         :                                                                                                                          
 3i9j(A) : DNPNARECRLA                                                                                                              
           ___________                                                                                                              

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
4.6
Translation
(A)
-0.3
Closure
(%)
75.1
Bending Residues
( green )
  44 - 45
  47 - 52
  66 - 68
  112 - 113
  119 - 134
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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