Bifunctional P-450/nadph-P450 Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bifunctional P-450/nadph-P450 Reductase
  Conformer 1
(PDB)
4kf2 (A)
  Conformer 2
(PDB)
3qi8 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 405 0.97   5 - 174   213 - 455
2 36 0.74   175 - 212

Sequence


           ________________________________________________________________________________________________________________________ 
 4kf2(A) : **KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFFGDGLVTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMV 
         :                                                                                                                          
 3qi8(B) : TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYISSQRLVKEACDESRFDKNLSQARKFVRDFAGDGLATSWTHEKNWKKARNILLPRLSQQAMKGYHAMMV 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________________174___________________________________212____________________________ 
 4kf2(A) : DIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA--dDPAYDENKRQFQEDIKVMNDLVDKIIADRKASqSDDLLTHMLNGKD 
         :                                                                                                                          
 3qi8(B) : DIAVQLVQKWERLNSDEHIEVPEDMTRLTLDTIGLCGFNYRINSFYRDQPHPFITSMVRALDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA---dDLLTHMLHGKD 
           ___________________________________________________174___________________________________212____________________________ 

           ________________________________________________________________________________________________________________________ 
 4kf2(A) : PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 
         :                                                                                                                          
 3qi8(B) : ---gEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHR 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________________________________________________                       
 4kf2(A) : DKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGG***                       
         :                                                                                                                          
 3qi8(B) : DKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIEETLTLKPKGFVIKAKSKKIPLGGIPS                       
           __________________________________________________________________________________________________                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
23.4
Translation
(A)
2.4
Closure
(%)
98.8
Bending Residues
( green )
  174 - 176
  212 - 213
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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