Death-Associated Protein Kinase 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Death-Associated Protein Kinase 1
  Conformer 1
(PDB)
1wvw (A)
  Conformer 2
(PDB)
1wvy (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 173 0.73   74 - 77   94 - 134   136 - 140   145 - 160   166 - 178   181 - 274
2 96 0.63   6 - 73   78 - 93   135 - 135   141 - 144   161 - 165   179 - 180

Sequence


           ______________________________________________________________________73__77______________93____________________________ 
 1wvw(A) : TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 
         :                                                                                                                          
 1wvy(A) : **FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK 
           ______________________________________________________________________73__77______________93____________________________ 

           __________134___140_144_____________160__165_____173____________________________________________________________________ 
 1wvw(A) : QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 
         :                                                                                                                          
 1wvy(A) : QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 
           __________134___140_144_____________160__165_____173____________________________________________________________________ 

           ___________________________________                                                                                      
 1wvw(A) : SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK                                                                                      
         :                                                                                                                          
 1wvy(A) : SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK                                                                                      
           ___________________________________                                                                                      

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.6
Translation
(A)
-0.1
Closure
(%)
50.9
Bending Residues
( green )
  73 - 74
  77 - 78
  93 - 94
  134 - 136
  140 - 141
  144 - 145
  160 - 161
  165 - 166
  173 - 181
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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