Fibroblast Growth Factor-10

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Fibroblast Growth Factor-10
  Conformer 1
(PDB)
1nun (A)
  Conformer 2
(PDB)
1pjm (B)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 42 10.3   119 - 124   137 - 162   166 - 168   176 - 182
2 40 9.21   125 - 136   163 - 165   169 - 175   183 - 200

Sequence


           _____________________________________________________124_______134_________________________162___168____175____182______ 
 1nun(A) : SYNHLQGDVRWRKLFSFTKYFLKIEKNGKVSGTKKENCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGKLYGSKEFNNDCKLKERIEENGYNTYASFNWQHNGRQMYVALNGKGAPRR 
         :                                                                                                                          
 1pjm(B) : *******************************************QGTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNI 
           ______________________________________________________83________93_________________________121___127____134____141______ 

           ________________________________________________________________________________________________________________________ 
 1nun(A) : GQKTRRKNTSAHFLPMVVH***************************************************************************************************** 
         :                                                                                                                          
 1pjm(B) : ASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEV 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1nun(A) : ************************************************************************************************************************ 
         :                                                                                                                          
 1pjm(B) : LADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLS 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________________________________________           
 1nun(A) : **************************************************************************************************************           
         :                                                                                                                          
 1pjm(B) : KADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKYFS           
           ______________________________________________________________________________________________________________           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
119.9
Translation
(A)
3.3
Closure
(%)
87.7
Bending Residues
( green )
  124 - 125
  134 - 139
  162 - 163
  165 - 166
  168 - 169
  175 - 176
  182 - 184
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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