Aldo-Keto Reductase Family 1 Member C2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aldo-Keto Reductase Family 1 Member C2
  Conformer 1
(PDB)
1xjb (A)
  Conformer 2
(PDB)
1j96 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 292 0.31   6 - 120   128 - 128   139 - 310   318 - 321
2 24 0.3   121 - 127   129 - 138   311 - 317

Sequence


           _______________________________________________________________________________________________________________________1 
 1xjb(A) : SVDDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHF 
         :                                                                                                                          
 1j96(A) : **DDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHF 
           _______________________________________________________________________________________________________________________1 

           20____127________138____________________________________________________________________________________________________ 
 1xjb(A) : PVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLED 
         :                                                                                                                          
 1j96(A) : PVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLED 
           20____127________138____________________________________________________________________________________________________ 

           _____________________________________________________________________310____317______                                    
 1xjb(A) : PVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVRYLTLDIFAGPPNYPFSDEY                                    
         :                                                                                                                          
 1j96(A) : PVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVRYLTLDIFAGPPNYPFSDEY                                    
           _____________________________________________________________________310____317______                                    

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
4.2
Translation
(A)
-0.1
Closure
(%)
87.6
Bending Residues
( green )
  120 - 121
  127 - 129
  138 - 139
  310 - 311
  317 - 318
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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