Carbon Monoxide Oxidation System Transcription Regulator

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Carbon Monoxide Oxidation System Transcription Regulator
  Conformer 1
(PDB)
1ft9 (A)
  Conformer 2
(PDB)
1ft9 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 129 0.86   4 - 132
2 73 0.72   133 - 211

Sequence


           ________________________________________________________________________________________________________________________ 
 1ft9(A) : PPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFCMHSGCLVEATERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRALT 
         :                                                                                                                          
 1ft9(B) : PPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFCMHSGCLVEATERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRALT 
           ________________________________________________________________________________________________________________________ 

           ____128___________________________________________________________________________________                               
 1ft9(A) : SCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTgVIVSVDFTVEEIANLIGSSRQTTSTALNSLIKEGYISRQGRGHYTIPNLVRLKAAA                               
         :                                                                                                                          
 1ft9(B) : SCMRTIEDLMFHDIKQRIAGFFIDHANTTG----vIVSVDFTVEEIANLIGSSRQTTSTALNSLIKEGYISRQGRGHYTIPNLVRLKAAA                               
           ____128___________________________________________________________________________________                               

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
67.5
Translation
(A)
-1.6
Closure
(%)
84.0
Bending Residues
( green )
  128 - 133
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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