Fibroblast Growth Factor Receptor 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Fibroblast Growth Factor Receptor 2
  Conformer 1
(PDB)
1e0o (D)
  Conformer 2
(PDB)
1djs (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 97 0.55   151 - 251
2 91 1.25   252 - 358

Sequence


           _____________________________________________________________________________________________________250________________ 
 1e0o(D) : **NNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSPHRPILQAGLPANA 
         :                                                                                                                          
 1djs(A) : TLEPEGAPYWTNTEK-eKRLHAVPAANTVKFRCPAGGNP-pT-rWLKNGKEFKQEHRIGGYKVRNQHWSLI-eSVVPSDKGNYTCVVENEYGSINHTYHLDVVERSPHRPILQAGLPANA 
           _____________________________________________________________________________________________________250________________ 

           ______________________________________________________________________________________                                   
 1e0o(D) : STVVGGDVEFVCKVYSDAQPHIQWIKH------kVLKAAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLTVL**                                   
         :                                                                                                                          
 1djs(A) : STVVGGDVEFVCKVYSDAQPHIQWIKHVEKpYLKVLKAAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLTVLPA                                   
           ______________________________________________________________________________________                                   

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
169.0
Translation
(A)
1.9
Closure
(%)
18.6
Bending Residues
( green )
  250 - 254
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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