Heat Shock Locus U

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Heat Shock Locus U
  Conformer 1
(PDB)
1do0 (C)
  Conformer 2
(PDB)
1do0 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 300 1.9   4 - 336   380 - 382
2 102 0.47   337 - 379   383 - 441

Sequence


           ________________________________________________________________________________________________________________________ 
 1do0(C) : SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRY 
         :                                                                                                                          
 1do0(B) : SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRY 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1do0(C) : RAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDaRKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGV 
         :                                                                                                                          
 1do0(B) : RAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDaRKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGV 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________336_______________________________________378_382_______________ 
 1do0(C) : QRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHT 
         :                                                                                                                          
 1do0(B) : QRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHT 
           ________________________________________________________336_______________________________________378_382_______________ 

           ______________________________________________                                                                           
 1do0(C) : VLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL                                                                           
         :                                                                                                                          
 1do0(B) : VLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL                                                                           
           ______________________________________________                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
10.5
Translation
(A)
0.4
Closure
(%)
22.7
Bending Residues
( green )
  336 - 338
  378 - 380
  382 - 383
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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