Interleukin-10

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Interleukin-10
  Conformer 1
(PDB)
1lk3 (A)
  Conformer 2
(PDB)
1vlk  
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 91 1.97   23 - 113
2 41 1.6   114 - 155

Sequence


           _______________________________________________________________________________________________113______________________ 
 1lk3(A) : *****NMLRDLRDAFSRVKTFFQMKDQLDNLLLKESLLEDFKGYLGCQALSEMIQFYLEEVMPQAENQDPDIKAHVNSLGENLKTLRLRLRRCHRFLPCE-kSKAVEQVKNAFNKLQEKG 
         :                                                                                                                          
 1vlk    : CDNFPQMLRDLRDAFSRVKTFFQTKDEVDNLLLKESLLEDFKGYLGCQALSEMIQFYLEEVMPQAENQDPEAKDHVNSLGENLKTLRLRLRRCHRFLPCENKSKAVEQIKNAFNKLQEKG 
           _______________________________________________________________________________________________113______________________ 

           ______________________                                                                                                   
 1lk3(A) : IYKAMSEFDIFINYIEAYMTMK                                                                                                   
         :                                                                                                                          
 1vlk    : IYKAMSEFDIFINYIEAYMTIK                                                                                                   
           ______________________                                                                                                   

Morph

Morph animation in progress.
Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
176.7
Translation
(A)
0.5
Closure
(%)
99.8
Bending Residues
( green )
  113 - 118
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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