Arginine Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Arginine Kinase
  Conformer 1
(PDB)
1m80 (A)
  Conformer 2
(PDB)
1rl9 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 201 1.37   4 - 98   129 - 171   187 - 212   219 - 230   252 - 276
2 139 2.55   99 - 128   172 - 186   213 - 218   231 - 251   277 - 355

Sequence


           _______________________________________________________________________________________________98_______________________ 
 1m80(A) : VDQATLDKLEAGFKKLQEASDCKSLLKKHLTKDVFDSIKNKKTGMGATLLDVIQSGVENLDSGVGIYAPDAESYRTFGPLFDPIIDDYHGGFKLTDKHPPKQWGDINTLVGLDPAGQFII 
         :                                                                                                                          
 1rl9(A) : VDQATLDKLEAGFKKLQEASDCKSLLKKHLTKDVFDSIKNKKTGMGATLLDVIQSGVENLDSGVGIYAPDAESYRTFGPLFDPIIDDYHGGFKLTDKHPPKEWGDINTLVDLDPAGQFII 
           _______________________________________________________________________________________________98_______________________ 

           ____128______________________________________169______________186_______________________212___218_________230___________ 
 1m80(A) : STRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLKT 
         :                                                                                                                          
 1rl9(A) : STRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLKT 
           ____128______________________________________169______________186_______________________212___218_________230___________ 

           _______251______________________276_________________________________________________________________________________     
 1m80(A) : VYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRKVLEDIASKFNLQV------------gVYDISNKRRLGLTEYQAVREMQDGILEMIKMEKAAA     
         :                                                                                                                          
 1rl9(A) : VYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRKVLEDIASKFNLQVRGTRGEHTESEGGVYDISNKRRLGLTEYQAVREMQDGILEMIKMEKAAA     
           _______251______________________276_________________________________________________________________________________     

Morph

Morph animation in progress.
Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
18.2
Translation
(A)
0.6
Closure
(%)
97.7
Bending Residues
( green )
  98 - 99
  128 - 129
  169 - 172
  186 - 187
  212 - 213
  218 - 219
  230 - 231
  251 - 252
  276 - 277
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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