Epidermal Growth Factor Receptor

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Epidermal Growth Factor Receptor
  Conformer 1
(PDB)
1m17 (A)
  Conformer 2
(PDB)
3pp0 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 223 1.14   685 - 693   703 - 705   718 - 720   746 - 755   757 - 956
2 56 1.95   676 - 684   694 - 702   706 - 717   721 - 745   756 - 756

Sequence


           __________684___690_________702____________717________________________744_______754_____________________________________ 
 1m17(A) : GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL 
         :                                                                                                                          
 3pp0(A) : **APNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLL 
           __________716___722_________734____________749________________________776_______786_____________________________________ 

           ________________________________________________________________________________________________________________________ 
 1m17(A) : NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 
         :                                                                                                                          
 3pp0(A) : NWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA--gKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________                                                 
 1m17(A) : PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHlMDEEDMDDVVDADEYLIP                                                 
         :                                                                                                                          
 3pp0(A) : PPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVIQNED**********************                                                 
           ________________________________________________________________________                                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
19.4
Translation
(A)
0.2
Closure
(%)
32.4
Bending Residues
( green )
  684 - 685
  690 - 694
  702 - 703
  705 - 706
  717 - 718
  720 - 721
  744 - 748
  754 - 762
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download