Glyoxylate Reductase/hydroxypyruvate Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glyoxylate Reductase/hydroxypyruvate Reductase
  Conformer 1
(PDB) 		2gcg (B)
  Conformer 2
(PDB) 		2wwr (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 184 0.44   106 - 296
2 127 0.37   8 - 105   297 - 325

Sequence


           _________________________________________________________________________________________________105____________________ 
 2gcg(B) : LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRR 
         :                                                                                                                          
 2wwr(A) : LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRR 
           _________________________________________________________________________________________________105____________________ 

           ________________________________________________________________________________________________________________________ 
 2gcg(B) : LPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISR 
         :                                                                                                                          
 2wwr(A) : LPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVAC-------gLCNKDFFQKMKETAVFINISR 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________296________________________________                                      
 2gcg(B) : GDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSELKL                                      
         :                                                                                                                          
 2wwr(A) : GDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSELK*                                      
           ________________________________________________296________________________________                                      

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		4.1
Translation
(A) 		0.3
Closure
(%) 		74.1
Bending Residues
( green ) 		  105 - 106
  296 - 297
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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