Isochorismate Synthase/isochorismate-Pyruvate Lyase Mbti

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Isochorismate Synthase/isochorismate-Pyruvate Lyase Mbti
  Conformer 1
(PDB) 		3log (A)
  Conformer 2
(PDB) 		6za4 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 370 0.72   17 - 250   254 - 263   267 - 268   301 - 303   306 - 318   340 - 447
2 55 1.06   251 - 253   264 - 266   269 - 300   304 - 305   319 - 339

Sequence


           ________________________________________________________________________________________________________________________ 
 3log(A) : SSSIPMPAGVNPADLAAELAAVVTESVDEDYLLYECDGQWVLAAGVQAMVELDSDELRVIRDGVTRRQQWSGRPGAALGEAVDRLLLETDQAFGWVAFEFGVHRYGLQQRLAPHTPLARV 
         :                                                                                                                          
 6za4(A) : SSSIPMPAGVNPADLAAELAAVVTESVDEDYLLYECDGQWVLAAGVQAMVELDSDELRVIRDGVTRRQQWSGRPGAALGEAVDRLLLETDQAFGWVAFEFGVHRYGLQQRLAPHTPLARV 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________________________________________________250____ 
 3log(A) : FSPRTRIMVSEKEIRLFDAGIRHREAIDRLLATGVREVPQSRSVDVSDDPSGFRRRVAVAVDEIAAGRYHKVILSRCVEVPFAIDFPLTYRLGRRHNTPVRSFLLQLGGIRALGYSPELV 
         :                                                                                                                          
 6za4(A) : FSPRTRIMVSEKEIRLFDAGIRHREAIDRLLATGVREVPQSRSVDVSDDPSGFRRRVAVAVDEIAAGRYHKVILSRCVEVPFAIDFPLTYRLGRRHNTPVRSFLLQLGGIRALGYSPELV 
           _________________________________________________________________________________________________________________250____ 

           ______263__________________________________300_______________318__________________339___________________________________ 
 3log(A) : TAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRSSLEEITDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASGIPKAAGVEAI 
         :                                                                                                                          
 6za4(A) : TAVRADGVVITEPLAG------gPAIDRLARDDLESNSKEIVEHAISVRSSLEEITDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASGIPKAAGVEAI 
           ______263__________________________________300_______________318__________________339___________________________________ 

           ___________________________________________________________________________                                              
 3log(A) : FRLDECPRGLYSGAVVMLSADGGLDAALTLRAAYQVGGRTWLRAGAGIIEESEPEREFEETCEKLSTLTPYLVAR                                              
         :                                                                                                                          
 6za4(A) : FRLDECPRGLYSGAVVMLSADGGLDAALTLRAAYQVGGRTWLRAGAGIIEESEPEREFEETCEKLSTLTPYLVAR                                              
           ___________________________________________________________________________                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		6.6
Translation
(A) 		1.2
Closure
(%) 		50.6
Bending Residues
( green ) 		  250 - 254
  263 - 264
  266 - 269
  300 - 301
  303 - 306
  318 - 319
  339 - 340
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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