Pantothenate Synthetase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Pantothenate Synthetase
  Conformer 1
(PDB) 		3cov (B)
  Conformer 2
(PDB) 		3ivc (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 179 0.52   5 - 184   248 - 254   257 - 257   268 - 268
2 93 0.6   185 - 247   255 - 256   258 - 267   269 - 286

Sequence


           ________________________________________________________________________________________________________________________ 
 3cov(B) : *AIPAFHPGELNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ----------pRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLRTTVQP 
         :                                                                                                                          
 3ivc(A) : MAIPAFHPGELNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLRTTVQP 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________184________________________________________________________ 
 3cov(B) : GPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLD 
         :                                                                                                                          
 3ivc(A) : GPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLD 
           _____________________________________________________________184________________________________________________________ 

           ____247____254____________________________________________                                                               
 3cov(B) : AAPGVAVDYLELRDIGLGPMPLNGSGRLLVAARLGTTRLLDNIAIEIG**********                                                               
         :                                                                                                                          
 3ivc(A) : AAPGVAVDYLELRDIGLGPMPLNGSGRLLVAARLGTTRLLDNIAIEIGTFAGTDRPDG                                                               
           ____247____254____________________________________________                                                               

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.8
Translation
(A) 		0.0
Closure
(%) 		100.0
Bending Residues
( green ) 		  184 - 185
  247 - 248
  254 - 269
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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