Phosphoglycerate Kinase, Testis Specific

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphoglycerate Kinase, Testis Specific
  Conformer 1
(PDB) 		2x15 (A)
  Conformer 2
(PDB) 		2xe6 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 212 0.99   7 - 200   222 - 224   394 - 415
2 190 0.85   201 - 221   225 - 393

Sequence


           ________________________________________________________________________________________________________________________ 
 2x15(A) : LSNKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENL 
         :                                                                                                                          
 2xe6(A) : **NKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENL 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________196_____________212______________________________ 
 2x15(A) : RFHVEEEGKGK-------kAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAF 
         :                                                                                                                          
 2xe6(A) : RFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAF 
           _______________________________________________________________________195_____________211______________________________ 

           ________________________________________________________________________________________________________________________ 
 2x15(A) : TFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKA 
         :                                                                                                                          
 2xe6(A) : TFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKA 
           ________________________________________________________________________________________________________________________ 

           ____________________________393________________________                                                                  
 2x15(A) : TSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSNI                                                                  
         :                                                                                                                          
 2xe6(A) : TSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSNI                                                                  
           ____________________________392________________________                                                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		27.7
Translation
(A) 		-0.9
Closure
(%) 		99.7
Bending Residues
( green ) 		  196 - 201
  212 - 229
  393 - 397
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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