Phosphoglucosamine Mutase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphoglucosamine Mutase
  Conformer 1
(PDB) 		3i3w (B)
  Conformer 2
(PDB) 		3pdk (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 352 2.36   5 - 368
2 70 2.39   369 - 440

Sequence


           ________________________________________________________________________________________________________________________ 
 3i3w(B) : KYFGTDGIRGEVANSTITVEFTQKLGNAVGSLINQK-NYPKFVIVGQDTRSSGGFLKFALVSGLNAAGIDVLDLGVVPTPVVAFtVKH-RAAAGFVITA-hNKFTDNGIKLFSSNGFKLD 
         :                                                                                                                          
 3pdk(B) : KYFGTDGVRG-VANKELTPELAFKIGRFGGYVLTKDTDRPK-VIIGRDTRISGHMLEGALVAGLLSTGAEVMRLGVISTPGVAYLTKALDAQAGVMISASHNPVQDNGIKFFGSDGFKLT 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3i3w(B) : DALEEEVE---DiDGDFIYQPQ-FKFGSYKILANAIDEYIESIYSRFAKFVNYKG-KVVVDCAHGAASHNFEALLDKFGINYVSIASNPDGLNINVGCGATCVSNIKKAVKEQKADLGIS 
         :                                                                                                                          
 3pdk(B) : DEQEAEIEALLDKEVDELPRPTGTNLGQVSDYFEGGQKYLQYIKQTVEE--DFSGLHIALDCAHGATSSLAPYLFADLEADISTMGTSPNGMNINDGVGSTHPEVLAELVKEKGADIGLA 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3i3w(B) : LDGDADRIIIVDENGQEIDGDGILNILAQYSDICGGT--NGIVGT-QtN-sYENHYRANKIPFIRSKVGDRYVLEDLVKYGYKIGGESSGHVINLNFGTTGDGLFTAIQLLAIFSQADKP 
         :                                                                                                                          
 3pdk(B) : FDGDGDRLIAVDEKGNIVDGDQIMFICAKYMKETGQLKHNTVVSTVMSNLGFYKALEANGITSDKTAVGDRYVMEEMKRGGYNLGGEQSGHIILLDYITTGDGMLSALQLVNIMKMTKKP 
           ________________________________________________________________________________________________________________________ 

           _________368_______________________________________________________________________________                              
 3i3w(B) : VSEFKLQGELq---QTLINVPLT-KKVAREDLQKVASDVNDVEKRLGNRGRVLLRPSGTEPVLRVv-EADDKSLATNEAEYLVEKVKQKL*                              
         :                                                                                                                          
 3pdk(B) : LSE--LAGEMTKFPQLLVNVRVTDKKLALEN-EKIKEIIRVVEEEMNGDGRILVRPSGTEPLIRVMAEAPTQEVCDAYVHRIVEVVKAEVG                              
           _________371_______________________________________________________________________________                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		56.0
Translation
(A) 		-1.4
Closure
(%) 		91.4
Bending Residues
( green ) 		  368 - 369
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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