Phosphopantetheine Adenylyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Phosphopantetheine Adenylyltransferase
  Conformer 1
(PDB) 		3otw (A)
  Conformer 2
(PDB) 		3nv7 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 86 0.47   5 - 90
2 65 3.57   91 - 155

Sequence


           _______________________________________________________________________________________89_______________________________ 
 3otw(A) : MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMIQLATKSFKNVECVAFEGLLANLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMP 
         :                                                                                                                          
 3nv7(A) : **KVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMIQLATKSFKNVECVAFEGLLAYLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMP 
           _______________________________________________________________________________________89_______________________________ 

           _____________________________________                                                                                    
 3otw(A) : TLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKA                                                                                    
         :                                                                                                                          
 3nv7(A) : TLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKA                                                                                    
           _____________________________________                                                                                    

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		173.7
Translation
(A) 		0.2
Closure
(%) 		14.0
Bending Residues
( green ) 		  89 - 93
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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