Probable Butyrate Kinase 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Probable Butyrate Kinase 2
  Conformer 1
(PDB) 		1x9j (A)
  Conformer 2
(PDB) 		1saz (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 179 0.63   132 - 148   155 - 158   173 - 179   184 - 332   363 - 369
2 176 0.44   4 - 131   149 - 154   159 - 172   180 - 182   333 - 362

Sequence


           ________________________________________________________________________________________________________________________ 
 1x9j(A) : MFRILTINPGSTSTKLSIFEDERMVKMQNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAFVSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSET 
         :                                                                                                                          
 1saz(A) : *FRILTINPGSTSTKLSIFEDER-vK-qNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAFVSRGGLLDPIPGGVYLVDGL-iKTLKSGKNGEHASNLGAIIAHRFSSET 
           ________________________________________________________________________________________________________________________ 

           ________131______________148_______158___________172____179_____________________________________________________________ 
 1x9j(A) : GVPAYVVDPVVVDEMEDVARVSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRKGRVIDVNNALDGDGPFTPERSGTLPLTQLVDLCFSGKFTYEEMKKR 
         :                                                                                                                          
 1saz(A) : GVPAYVVDPVVVDE-eDVARVSGHPNYQRKSIFHALNQKTVAKEVAR--nKRYEE-nLVVAH-gGGISIAAHRKGRVIDVNNALDGDGPFTPERSGTLPLTQLVDLCFSGKFTYEE-kKR 
           ________131______________148_______158___________172____179_____________________________________________________________ 

           _________________________________________________________________________________________332___________________________3 
 1x9j(A) : IVGNGGLVAYLGTSDAREVVRRIKQGDEWAKRVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRGEEKPKNYSEESR 
         :                                                                                                                          
 1saz(A) : IVGNGGLVAYLGTSDAREVVRRIKQGDEWAKRVYRA-aYQIAKWIGK-aAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRGEEKPKNYSEESR 
           _________________________________________________________________________________________332___________________________3 

           62_____________                                                                                                          
 1x9j(A) : RWRERYDSYLDGI**                                                                                                          
         :                                                                                                                          
 1saz(A) : RWRERYDSYLDGILR                                                                                                          
           62_____________                                                                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		4.0
Translation
(A) 		-0.1
Closure
(%) 		58.0
Bending Residues
( green ) 		  131 - 132
  148 - 155
  158 - 159
  172 - 173
  179 - 180
  182 - 184
  332 - 333
  362 - 363
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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