Redox-Sensing Transcriptional Repressor Rex 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Redox-Sensing Transcriptional Repressor Rex 1
  Conformer 1
(PDB) 		5zz7 (A)
  Conformer 2
(PDB) 		5zz7 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 128 0.61   79 - 206
2 71 0.46   8 - 78

Sequence


           __________________________________________________________________________78____________________________________________ 
 5zz7(A) : EKIPKPVSKRLVSYYMCLERLLDEGVEVVSSEELARRLDLKASQIRKDLSYFGEFGKRGVGYNVEHLYDAIGEILGVKKEWKLVVVGAGNIGRAVANYTVMKEKGFRIIGIFDSDPSKIG 
         :                                                                                                                          
 5zz7(B) : ***PKPVSKRLVSYYMCLERLLDEGVEVVSSEELARRLDLKASQIRKDLSYFGEFGKRGVGYNVEHLYDAIGEILGVKKEWKLVVVGAGNIGRAVANYTVMKEKGFRIIGIFDSDPSKIG 
           __________________________________________________________________________78____________________________________________ 

           ______________________________________________________________________________________                                   
 5zz7(A) : KEAAPGLTVSDVSELEKFVEEHGVEIGVIAVPAEHAQEIAERLEKAGIKGILNFAPVKIKVSVPVENIDITASLRVLTFEIVRRNS                                   
         :                                                                                                                          
 5zz7(B) : KEAAPGLTVSDVSELEKFVEEHGVEIGVIAVPAEHAQEIAERLEKAGIKGILNFAPVKIKVSVPVENIDITASLRVLTFEIVRRNS                                   
           ______________________________________________________________________________________                                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		43.4
Translation
(A) 		-3.7
Closure
(%) 		86.6
Bending Residues
( green ) 		  78 - 82
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

Download and extract PyMOL PML script file Download