Sam-Dependent Methyltransferases

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Sam-Dependent Methyltransferases
  Conformer 1
(PDB) 		4d7k (E)
  Conformer 2
(PDB) 		4d7k (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 188 0.99   13 - 168   191 - 191   258 - 262   287 - 311   336 - 336
2 143 0.57   169 - 190   192 - 257   263 - 286   312 - 335   337 - 343

Sequence


           ________________________________________________________________________________________________________________________ 
 4d7k(E) : RTAAQRLYQYNVDLKVAFVLYAVAKLHLPDLLADGPRTTADLAAATGSDPSRLRRLLRAAAGADALREVPEDSFELAPMGDLLRSGHPRSMRGMTTFFAEPDVLAAYGDLVESVRTGVPA 
         :                                                                                                                          
 4d7k(A) : RTAAQRLYQYNVDLKVAFVLYAVAKLHLPDLLADGPRTTADLAAATGSDPSRLRRLLRAAAGADALREVPEDSFELAPMGDLLRSGHPRSMRGMTTFFAEPDVLAAYGDLVESVRTGVPA 
           ________________________________________________________________________________________________________________________ 

           _________________________________166____________________189_____________________________________________________________ 
 4d7k(E) : FQLRHREPLYDFLARPQHKEVRDEFDAAMVEFGQYFADDFLTSFDFGRFTRFADIGGGRGQFLAGVLTAVPSSTGVLVDGPAVAASAHKFLASQNLTERVEVRIGDFFDVLPTGCDAYVL 
         :                                                                                                                          
 4d7k(A) : FQLRHREPLYDFLARPQHKEVRDEFDAAMVEFGQYFADDFLTSFDFGRFTRFADIGGGRGQFLAGVLTAVPSSTGVLVDGPAVAASAHKFLASQNLTERVEVRIGDFFDVLPTGCDAYVL 
           _________________________________166____________________189_____________________________________________________________ 

           ____257_261____________________284_____________________308________________________335__________                          
 4d7k(E) : RGVLEDWADADAVRLLVRIRQAMGDAPEARLLILDSVIGETGELGKVLDLDMLVLVEGEHRTRAQWDDLLARAGFDIVGIHPAGDVWAVIECRGT                          
         :                                                                                                                          
 4d7k(A) : RGVLEDWADADAVRLLVRIRQAMGDAPEARLLILDSVIGETGELGKVLDLDMLVLVEGEHRTRAQWDDLLARAGFDIVGIHPAGDVWAVIECRGT                          
           ____257_261____________________284_____________________308________________________335__________                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.2
Translation
(A) 		-0.6
Closure
(%) 		34.7
Bending Residues
( green ) 		  166 - 170
  189 - 192
  257 - 258
  261 - 263
  284 - 287
  308 - 312
  335 - 337
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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