Sensor Protein Cpxa

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Sensor Protein Cpxa
  Conformer 1
(PDB) 		4biu (A)
  Conformer 2
(PDB) 		4biv (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 54 0.74   250 - 302   418 - 420
2 50 1.3   191 - 249
3 136 0.68   303 - 407   421 - 452

Sequence


           ___________________________________________________________249________________________________________________300_______ 
 4biu(A) : KPARKLKNAADEVAQGNLRQHPE------eFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSET 
         :                                                                                                                          
 4biv(A) : KPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQ-vTALER--tSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDS-iNDLLV-sRNQQKNALVSET 
           ___________________________________________________________249________________________________________________300_______ 

           _________________________________________________________________________________________________407____________________ 
 4biu(A) : IKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTD----------gLGLAIVETA 
         :                                                                                                                          
 4biv(A) : IKANQLWSEVLDNAAFEAEQ-gKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETA 
           _________________________________________________________________________________________________407____________________ 

           _____________________________                                                                                            
 4biu(A) : IQQHRGWVKAEDSPLGGLRLVIWLPLYK*                                                                                            
         :                                                                                                                          
 4biv(A) : IQQHRGWVKAEDSPLGGLRLVIWLPLYKR                                                                                            
           _____________________________                                                                                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		24.3
Translation
(A) 		-0.3
Closure
(%) 		1.5
Bending Residues
( green ) 		  249 - 251
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		18.6
Translation
(A) 		1.0
Closure
(%) 		87.2
Bending Residues
( green ) 		  300 - 308
  407 - 422
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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