Titin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Titin
  Conformer 1
(PDB) 		2nzi (A)
  Conformer 2
(PDB) 		2nzi (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 96 0.56   97 - 192
2 96 0.31   1 - 96
3 96 0.26   193 - 288

Sequence


           ________________________________________________________________________________________________96______________________ 
 2nzi(A) : AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEV 
         :                                                                                                                          
 2nzi(B) : AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEV 
           ________________________________________________________________________________________________96______________________ 

           ____________________________________________________________________189_________________________________________________ 
 2nzi(A) : VSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATT 
         :                                                                                                                          
 2nzi(B) : VSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATT 
           ____________________________________________________________________189_________________________________________________ 

           ____________________________________________________                                                                     
 2nzi(A) : AERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKE                                                                     
         :                                                                                                                          
 2nzi(B) : AERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTITKE                                                                     
           ____________________________________________________                                                                     

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.0
Translation
(A) 		-0.7
Closure
(%) 		89.8
Bending Residues
( green ) 		  96 - 97
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		5.0
Translation
(A) 		-0.5
Closure
(%) 		85.4
Bending Residues
( green ) 		  189 - 193
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download