Udp-Galactose 4-Epimerase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-Galactose 4-Epimerase
  Conformer 1
(PDB) 		1hzj (A)
  Conformer 2
(PDB) 		1hzj (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 180 0.6   4 - 4   6 - 26   29 - 50   52 - 127   146 - 184   190 - 192   253 - 255   260 - 268   312 - 313   315 - 318
2 161 0.55   5 - 5   27 - 28   51 - 51   128 - 145   185 - 189   193 - 252   256 - 259   269 - 311   314 - 314   319 - 344

Sequence


           __4____________________26______________________50_______________________________________________________________________ 
 1hzj(A) : AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 
         :                                                                                                                          
 1hzj(B) : AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 
           __4____________________26______________________50_______________________________________________________________________ 

           ___127_______________145____________________________________184__189____________________________________________________ 
 1hzj(A) : HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY 
         :                                                                                                                          
 1hzj(B) : HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDY 
           ___127_______________145____________________________________184__189____________________________________________________ 

           ________252____259______268________________________________________311____318____________________________                
 1hzj(A) : IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT                
         :                                                                                                                          
 1hzj(B) : IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT                
           ________252____259______268________________________________________311____318____________________________                

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		5.5
Translation
(A) 		-0.3
Closure
(%) 		99.2
Bending Residues
( green ) 		  4 - 6
  26 - 29
  50 - 52
  127 - 128
  145 - 146
  184 - 185
  189 - 190
  192 - 193
  252 - 253
  255 - 256
  259 - 261
  268 - 269
  311 - 315
  318 - 319
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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