Sucrose-Phosphatase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Sucrose-Phosphatase
  Conformer 1
(PDB) 		1s2o (A)
  Conformer 2
(PDB) 		1tj4 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 35 0.89   64 - 83   142 - 143   158 - 158   160 - 171
2 132 0.49   3 - 63   172 - 242
3 73 0.62   84 - 141   144 - 157   159 - 159

Sequence


           _____________________________________________________________63__________________83_____________________________________ 
 1s2o(A) : MRQLLLISDLDNTWVGDQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYH 
         :                                                                                                                          
 1tj4(A) : MRQLLLISDLDNTWVGDQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYH 
           _____________________________________________________________63__________________83_____________________________________ 

           __________133_____________________157___________171_____________________________________________________________________ 
 1s2o(A) : LDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF 
         :                                                                                                                          
 1tj4(A) : LDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF 
           __________133_____________________157___________171_____________________________________________________________________ 

           ____                                                                                                                     
 1s2o(A) : DFLS                                                                                                                     
         :                                                                                                                          
 1tj4(A) : DFLS                                                                                                                     
           ____                                                                                                                     

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.1
Translation
(A) 		-0.5
Closure
(%) 		83.9
Bending Residues
( green ) 		  63 - 64
  171 - 174
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		15.9
Translation
(A) 		-0.2
Closure
(%) 		100.0
Bending Residues
( green ) 		  83 - 85
  133 - 144
  157 - 160
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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