Heat Shock Protein Hsp 90-Beta

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Heat Shock Protein Hsp 90-Beta
  Conformer 1
(PDB) 		3pry (A)
  Conformer 2
(PDB) 		1usu (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 148 1.45   288 - 437   440 - 451
2 88 1.16   438 - 439   452 - 537

Sequence


           ________________________________________________________________________________________________________________________ 
 3pry(A) : KTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPF----kNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKN 
         :                                                                                                                          
 1usu(A) : PTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESnNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNL------qNKIMKVIRKN 
           ________________________________________________________________________________________________________________________ 

           ___________________________437___________451____________________________________________________________________________ 
 3pry(A) : IVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKE 
         :                                                                                                                          
 1usu(A) : IVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKE 
           ___________________________425___________439____________________________________________________________________________ 

           ___________________                                                                                                      
 3pry(A) : FDGKSLVSVTKEGLELAEN                                                                                                      
         :                                                                                                                          
 1usu(A) : FEGKTLVDITKD*******                                                                                                      
           ___________________                                                                                                      

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		18.8
Translation
(A) 		-0.3
Closure
(%) 		60.4
Bending Residues
( green ) 		  437 - 440
  451 - 452
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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