Ig Epsilon Chain C Region

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ig Epsilon Chain C Region
  Conformer 1
(PDB) 		2wqr (A)
  Conformer 2
(PDB) 		1f6a (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 109 0.7   345 - 348   437 - 534   536 - 542
2 104 0.86   330 - 344   349 - 436   535 - 535

Sequence


           ___________________________________________________________________________________________________________________344_3 
 2wqr(A) : DFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPF 
         :                                                                                                                          
 1f6a(B) : ****************************************************************************************************PC-DSNPRGVSAYLSRPSPF 
           ___________________________________________________________________________________________________________________344_3 

           48_____________________________________________________________________________________436______________________________ 
 2wqr(A) : DLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI 
         :                                                                                                                          
 1f6a(B) : DLFIRKSPTITCLVVDLAPSKGTVNLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLI 
           48_____________________________________________________________________________________436______________________________ 

           _________________________________________________________________534___________                                          
 2wqr(A) : QNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVNP                                          
         :                                                                                                                          
 1f6a(B) : QNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSVN*                                          
           _________________________________________________________________534___________                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		15.6
Translation
(A) 		0.8
Closure
(%) 		72.2
Bending Residues
( green ) 		  344 - 345
  348 - 349
  436 - 437
  534 - 536
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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