Udp-Galactose 4-Epimerase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-Galactose 4-Epimerase
  Conformer 1
(PDB) 		1ek6 (B)
  Conformer 2
(PDB) 		3enk (B)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 201 1.0   6 - 134   136 - 138   154 - 186   190 - 194   244 - 269   325 - 331   337 - 340
2 127 0.82   135 - 135   139 - 152   187 - 189   195 - 243   270 - 324   332 - 336

Sequence


           ________________________________________________________________________________________________________________________ 
 1ek6(B) : ***AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEI 
         :                                                                                                                          
 3enk(B) : MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKR------EAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRV 
           ________________________________________________________________________________________________________________________ 

           _____________134_138_______148___________________________________186_____194____________________________________________ 
 1ek6(B) : MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 
         :                                                                                                                          
 3enk(B) : MRERAVKRIVFSSSATVYGVPERSPIDETFPLSA-TNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGV 
           _____________130_134_______144___________________________________181_____189____________________________________________ 

           __243_______________________269___________________________________________________323_____331__336__________             
 1ek6(B) : RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT             
         :                                                                                                                          
 3enk(B) : RDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAETIGWKAERDLERMCADHWRWQENNPRGF**             
           __238_______________________264___________________________________________________318_____326__331__________             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		8.1
Translation
(A) 		-0.4
Closure
(%) 		99.8
Bending Residues
( green ) 		  134 - 136
  138 - 139
  148 - 155
  186 - 187
  189 - 190
  194 - 195
  243 - 244
  269 - 270
  323 - 325
  331 - 332
  336 - 337
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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