Udp-N-Acetylglucosamine 2-Epimerase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Udp-N-Acetylglucosamine 2-Epimerase
  Conformer 1
(PDB) 		4neq (A)
  Conformer 2
(PDB) 		4nes (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 183 1.06   4 - 179   348 - 362
2 164 0.63   180 - 347

Sequence


           ________________________________________________________________________________________________________________________ 
 4neq(A) : KLSIILGTRPEIIKLSPIIRALEKTNIDWHIIHTN-----ndKIFFEELNLPNPKYNLNIGSGTHGEQTGKlIEIEKVLLKEKPDVVVVQGDTNTVLAGALVASKLKIDVAHVEAGLRSF 
         :                                                                                                                          
 4nes(A) : KLSIILGTRPEIIKLSPIIRALEKTNIDWHIIHTNQHYSENdKIFFEELNLPNPKYNLNIGSGTHGEQTGKlIEIEKVLLKEKPDVVVVQGDTNTVLAGALVASKLKIDVAHVEAGLRSF 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________174______________________________________________________________________ 
 4neq(A) : DRNpEEINRVLTDHISSYLFAPTEIAKNNLLREGIEENKIFVVGNTIVDATLQNLKIAEKNENVRAFFNSVVIDDDYFLLTLHRAENVDNKERLKNIVEGIFEIIEIYDKAIIFSIHPRT 
         :                                                                                                                          
 4nes(A) : DRNpEEINRVLTDHISSYLFAPTEIAKNNLLREGIEENKIFVVGNTIVDATLQNLKIAEKNENVRAFFNSVV--dDYFLLTLHRAENVDNKERLKNIVEGIFEIIEIYDKAIIFSIHPRT 
           _______________________________________________174______________________________________________________________________ 

           ________________________________________________________________________________________________345___________________   
 4neq(A) : KKRLKEFNLFDKLKSNKKIKIIEPVGYLEFLlEKNAELILTDSGGVQEEACILKVPCITLRDNTERPETVEVGANILVGDNKEKLIKAVEIlNKKRNWKNPFGNGKSGERIVRILTYG   
         :                                                                                                                          
 4nes(A) : KKRLKEFNLFDKLKSNKKIKIIEPVGYLEFLlEKNAELILTDSGGVQEEACILKVPCITLRDNTERPETVEVGANILVGDNKEKLIKAVEIlNKKRNWKNPFGNGKSGERIVRILTYG   
           ________________________________________________________________________________________________345___________________   

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		34.9
Translation
(A) 		1.0
Closure
(%) 		94.2
Bending Residues
( green ) 		  174 - 183
  345 - 350
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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