Xylose Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Xylose Reductase
  Conformer 1
(PDB) 		1jez (B)
  Conformer 2
(PDB) 		1k8c (A)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 218 0.25   11 - 213   269 - 270   305 - 317
2 35 0.26   244 - 264   291 - 304

Sequence


           ________________________________________________________________________________________________________________________ 
 1jez(B) : **PDIKLSSGHLMPSIGFGCWKLANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVP 
         :                                                                                                                          
 1k8c(A) : SIPDIKLSSGHLMPSIGFGCWKLANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVP 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________________________213______________________________ 
 1jez(B) : IEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSF----------------lFAHDTI 
         :                                                                                                                          
 1k8c(A) : IEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGPQSFVnQGRALNTPTLFAHDTI 
           _______________________________________________________________________________________213______________________________ 

           ________________264_____________________________________304__________________                                            
 1jez(B) : KAIAAKYNKTPAEVLLRWAAQRGIAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKLDIGLRFNDPWDWDNIPIFV                                            
         :                                                                                                                          
 1k8c(A) : KAIAAKYNKTPAEVLLRWAAQRGIAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKLDIGLRFNDPWDWDNIPIFV                                            
           ________________264_____________________________________304__________________                                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		3.1
Translation
(A) 		-0.3
Closure
(%) 		93.5
Bending Residues
( green ) 		  213 - 244
  264 - 291
  304 - 306
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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