Ketohexokinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Ketohexokinase
  Conformer 1
(PDB) 		6p2d (A)
  Conformer 2
(PDB) 		5wbz (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 224 0.71   5 - 12   38 - 63   82 - 94   120 - 296
2 68 1.21   13 - 37   64 - 81   95 - 119

Sequence


           _____________12_______________________37________________________63_______________80____________________________________1 
 6p2d(A) : *****EKQILCVGLVVLDIINVVDKYPEEDTDRRCLSQRWQRGGNASNSCTVLSLLGARCAFMGSLAPGHVADFLVADFRQRGVDVSQVTWQSQGDTPCSCCIVNNSNGSRTIILYDTNL 
         :                                                                                                                          
 5wbz(B) : GLVPRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTVLSLLGAPCAFMGSMAPGHVADFLVADFRRRGVDVSQVAWQSKGDTPSSCCIINNSNGNRTIVLHDTSL 
           _____________12_______________________37________________________63_______________80____________________________________1 

           19______________________________________________________________________________________________________________________ 
 6p2d(A) : PDVSAKDFEKVDLTRFKWIHIEGRNASEQVKMLQRIEEHNAKQPLPQKVRVSVEIEKPREELFQLFSYGEVVFVSKDVAKHLGFQSAVEALRGLYSRVKKGATLVCAWAEEGADALGPDG 
         :                                                                                                                          
 5wbz(B) : PDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDG 
           19______________________________________________________________________________________________________________________ 

           _____________________________________________________________                                                            
 6p2d(A) : QLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSKGNSMQEALRFGCQVAGKKCGLQGFDGIV                                                            
         :                                                                                                                          
 5wbz(B) : KLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDGIV                                                            
           _____________________________________________________________                                                            

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		15.5
Translation
(A) 		0.3
Closure
(%) 		65.0
Bending Residues
( green ) 		  12 - 13
  37 - 40
  63 - 64
  80 - 95
  119 - 120
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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