Probable 2-Dehydropantoate 2-Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Probable 2-Dehydropantoate 2-Reductase
  Conformer 1
(PDB) 		5zik (A)
  Conformer 2
(PDB) 		6k1r (B)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 144 0.44   16 - 105   115 - 116   120 - 170   176 - 176
2 139 0.41   106 - 114   117 - 119   171 - 175   177 - 298

Sequence


           ________________________________________________________________________________________________________105______114__11 
 5zik(A) : **MTWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQNGLGSQQAVAARLPRS 
         :                                                                                                                          
 6k1r(B) : SHMTWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQNGLGSQQAVAARLPRS 
           ________________________________________________________________________________________________________105______114__11 

           9______________________________________________168______________________________________________________________________ 
 5zik(A) : RCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDTNAPAWLTQLSQAGIPHSWSDDILERLWRKLALNCAINPLTVLHDCRNGGLRQHPEEIAALCDELGQLLHASGYDAAARSLLEDVR 
         :                                                                                                                          
 6k1r(B) : RCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDTNAPAWLTQLSQAGIPHSWSDDILERLWRKLALNCAINPLTVLHDCRNGGLRQHPEEIAALCDELGQLLHASGYDAAARSLLEDVR 
           9______________________________________________168______________________________________________________________________ 

           _________________________________________________________________                                                        
 5zik(A) : AVIDATAANYSSMHQDVTRGRRTEIGYLLGYACQHGQRLGLPLPRLGTLLARLQAHLRQRGLPDR                                                        
         :                                                                                                                          
 6k1r(B) : AVIDATAANYSSMHQDVTRGRRTEIGYLLGYACQHGQRLGLPLPRLGTLLARLQAHLRQRGLPDR                                                        
           _________________________________________________________________                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		4.4
Translation
(A) 		0.0
Closure
(%) 		92.0
Bending Residues
( green ) 		  105 - 106
  114 - 117
  119 - 120
  168 - 179
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download