Acetyltransferase, Gnat Family

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Acetyltransferase, Gnat Family
  Conformer 1
(PDB)
2i00 (B)
  Conformer 2
(PDB)
2i00 (F)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 235 0.66   16 - 149   298 - 398
2 151 0.36   150 - 297   399 - 401

Sequence


           ________________________________________________________________________________________________________________________ 
 2i00(B) : **TLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWIS 
         :                                                                                                                          
 2i00(F) : QLTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWIS 
           ________________________________________________________________________________________________________________________ 

           __________________149___________________________________________________________________________________________________ 
 2i00(B) : YLFPYNIPYYRRKGWEIMSDKLSFKIRDTQLPKTVPVPGMIERLAVDHPDVFDVYARFARQNHGALIRSAFNWEEYWRFENEEERTAAVYYGANQEPLGVLFYWVADEVFHIKEMFYLNQ 
         :                                                                                                                          
 2i00(F) : YLFPYNIPYYRRKGWEIMSDKLSFKIRDTQLPKTVPVPGMIERLAVDHPDVFDVYARFARQNHGALIRSAFNWEEYWRFENEEERTAAVYYGANQEPLGVLFYWVADEVFHIKEMFYLNQ 
           __________________149___________________________________________________________________________________________________ 

           ______________________________________________297_______________________________________________________________________ 
 2i00(B) : EARNGLWNFITAHFSMVYWVKGDIYKNEPLAFLLEDSQIKESIEPYYMARIVDVKAFLENFPFESTAKPFHFVVKDPVAEWNNGIFGLIWDENDQVTITDEPLGTAVHLDIQTLTCLVMN 
         :                                                                                                                          
 2i00(F) : EARNGLWNFITAHFSMVYWVKGDIYKNEPLAFLLEDSQIKESIEPYYMARIVDVKAFLENFPFESTAKPFHFVVKDPVAEWNNGIFGLIWDENDQVTITDEPLGTAVHLDIQTLTCLVMN 
           ______________________________________________297_______________________________________________________________________ 

           ___________________________398________                                                                                   
 2i00(B) : YRRPSYLHRIERIDTDKETLNSLERIFPDQEAYFSDYF                                                                                   
         :                                                                                                                          
 2i00(F) : YRRPSYLHRIERIDTDKETLNSLERIFPDQEAYFSDYF                                                                                   
           ___________________________398________                                                                                   

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.4
Translation
(A)
0.2
Closure
(%)
48.4
Bending Residues
( green )
  149 - 150
  297 - 298
  398 - 401
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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