1-Aminocyclopropane-1-Carboxylate Synthase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 1-Aminocyclopropane-1-Carboxylate Synthase
  Conformer 1
(PDB)
1b8g (B)
  Conformer 2
(PDB)
1ynu (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 325 0.61   6 - 18   50 - 338   349 - 349   351 - 360   365 - 367   392 - 402   404 - 404   406 - 409   414 - 419
2 81 0.81   19 - 49   339 - 348   350 - 350   361 - 364   368 - 391   403 - 403   405 - 405   410 - 413   420 - 424

Sequence


           ___6_____________________________________49_____________________________________________________________________________ 
 1b8g(B) : MLSRNATFNSsSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANET 
         :                                                                                                                          
 1ynu(A) : *LSRNAT---sSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANET 
           ___6_____________________________________49_____________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1b8g(B) : FIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISV 
         :                                                                                                                          
 1ynu(A) : FIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISV 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________________________338_______348_________360_364__ 
 1b8g(B) : MEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMR 
         :                                                                                                                          
 1ynu(A) : MEVLKD------sEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMR 
           _________________________________________________________________________________________338_______348_________360_364__ 

           ______________________391________402____409_413___419______________                                                      
 1b8g(B) : HLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGE**                                                      
         :                                                                                                                          
 1ynu(A) : HLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEYY                                                      
           ______________________391________402____409_413___419______________                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.6
Translation
(A)
-0.1
Closure
(%)
100.0
Bending Residues
( green )
  6 - 27
  49 - 50
  338 - 339
  348 - 351
  360 - 361
  364 - 365
  367 - 368
  391 - 392
  402 - 406
  409 - 410
  413 - 414
  419 - 420
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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