Comb10

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Comb10
  Conformer 1
(PDB) 		2bhv (F)
  Conformer 2
(PDB) 		2bhv (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 151 0.57   168 - 292   342 - 374
2 32 0.87   293 - 341

Sequence


           ______________________________________________________________________________________________________________________29 
 2bhv(F) : NKLLRTITADKMIPAFLITPISSQIAGKVIAQVESDIFAHMGKAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIITPHGINIMLTNAgYNGLVGELIERNFQRYGVPLLLSTLTNGLLI 
         :                                                                                                                          
 2bhv(A) : NKLLRTITADKMIPAFLITPISSQIAGKVIAQVESDIFAHMGKAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIITPHGINIMLTNA-yNGLVGELIERNFQRYGVPLLLSTLTNGLLI 
           ______________________________________________________________________________________________________________________29 

           2_________________________________341___________________________________                                                 
 2bhv(F) : GIT----dYLLMQLMRQSGMGINQVVNQILRDKSKIAPIVVIREGSRVFISPNTDIFFPIPRENEVIAEFLK                                                 
         :                                                                                                                          
 2bhv(A) : GITSAfGDYLLMQLMRQSGMGINQVVNQILRDKSKIAPIVVIREGSRVFISPNTDIFFPIPRENEVIAEFLK                                                 
           2_________________________________341___________________________________                                                 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		13.5
Translation
(A) 		0.3
Closure
(%) 		89.7
Bending Residues
( green ) 		  292 - 314
  341 - 343
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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